NCBI Gene Information — ncbi

A data table containing meta information about NCBI genes, including their type and associated species.

Usage

ncbi_info

Format

A data.table with the following columns:

type: A character vector representing the type of species.
species: A character vector representing the species that NCBI supports in its online platform.

Source

This data was obtained from the National Center for Biotechnology Information (NCBI) Gene database (https://www.ncbi.nlm.nih.gov/gene).

Examples

library(labyrinth)

data("ncbi_info", package = "labyrinth")

# Preview the data
head(ncbi_info)
#>                type                                   species
#>              <char>                                    <char>
#> 1: Archaea_Bacteria                                   Archaea
#> 2: Archaea_Bacteria                                  Bacteria
#> 3: Archaea_Bacteria Escherichia_coli_str._K-12_substr._MG1655
#> 4: Archaea_Bacteria               Pseudomonas_aeruginosa_PAO1
#> 5:            Fungi                                Ascomycota
#> 6:            Fungi                             Microsporidia